I have not had much time to play but one thing I did see was that this still happens with TTW. Probably some DLC dependency that hasn't been addressed yet.
If you are really interested though, I was able to get around it.
I have a patch on Nexus that adds a travel point from Orion Station (Librarian) to The Wheel (Skunkwater Gulch). It was for old TTW but still works.
You can go through the quest normally, then instead of going to Japan, go to The Wheel and enter Orion Station. From there you can go to the back entrance of Valley of Kings, and then proceed like normal to N64, rescue Angelina, etc. There might have been a console unlock of one of the portals in there, I can't remember. Haven't tried going back atfterward to get Hanzo's sword but I expect it would still crash :/. Oh, on the plus side though, Market Comes Alive *does* work on this version of TTW, and did not on the old version. I needed 4GB loader for post-quest population but that was the only change.