I've finally finished the Vanilla Main Quest and the Vanilla Sidequests for Fallout 3.
I made a log of all the bugs I found that anyone should be able replicate while playing.
https://drive.google.com/file/d/0BxyuSOd3qrI0aUt3eXpTQk1GQTg/edit?usp=sharing
Whenever I get time I'm going to play through DLC's.