[quote=UltimateZero]
RoyBatty: Yeah, I've noticed some issues like that with compatibility patches. Luckily WryeFlash allows you to change masters (and I think FNVEdit does as well?), so with some work that sort of thing can be fixed.
I also have one I'm actually looking at as I write this that has Project Nevada - Core.esm prioritized above FalloutNV.esm. Not the exact problem you're describing, but still, no words to describe how they messed that one up.
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And to add to the wall of text I made above, I forgot to mention FormID Lists. If you're making a Bashed patch, be sure to compare FormID Lists as well. Like the leveled lists, WryeFlash likes to just mash everything together on the FormID Lists. It can also miss some things surprisingly, so you'll want to keep an eye on those for the same reason. I added some custom FormID changes to a mod I was tweaking, and while the Merged patch picked those up, WryeFlash did not.
I guess it's easiest to say that with the Merged patch you're often adding content, and with the Bashed patch you're probably removing it :P
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if the tags delev for removal of items from lists and relev for adding items to lists and you can use those two tags together on a plugin that both adds and removes from lists